peak-motifs random-genome_fragments-siGATA

Motif discovery

Motif 1 oligos_6nt_mkv4_m1

dwCTTTTCwh

DWGAAAAGWH

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor dwCTTTTCwh

NFATC2 MA0152.1 D 7 0.7000 0.811 0.568 ...TTTTCwh TTTTCCA

Mecom MA0029.1 R 10 0.7143 0.758 0.542 wwCTTTTCwh ....ATCTTRTCTT

Total maches= 2

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 585 (8.31%)
Max nb of predicted sites per peak: 4
(rand_1088)
Mean nb of predicted sites per peak: 1.11

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 2 oligos_6nt_mkv4_m2

wtAAATTAtw

WATAATTTAW

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wtAAATTAtw

Prrx2 MA0075.1 D 5 0.5000 0.998 0.499 ...AATTA.. AATTA

Pdx1 MA0132.1 R 6 0.6000 0.897 0.538 ...AATTAt. MATTAG

HOXA5 MA0158.1 R 7 0.6364 0.833 0.530 ...AATTAtw MATTWVH.

Total maches= 7 (4 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 617 (8.76%)
Max nb of predicted sites per peak: 4
(rand_2927)
Mean nb of predicted sites per peak: 1.13

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 3 oligos_6nt_mkv4_m3

syCACTGCAcyC

GRGTGCAGTGRS

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syCACTGCAcyC

Total maches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 692 (9.83%)
Max nb of predicted sites per peak: 5
(rand_6426)
Mean nb of predicted sites per peak: 1.37

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 4 oligos_6nt_mkv4_m4

csAGGCTGGGCkc

GMGCCCAGCCTSG

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csAGGCTGGGCkc

Total maches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 771 (10.95%)
Max nb of predicted sites per peak: 9
(rand_746)
Mean nb of predicted sites per peak: 1.38

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 5 oligos_6nt_mkv4_m5

mkCCTCCCrss

SSYGGGAGGMK

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor mkCCTCCCrss

EBF1 MA0154.1 R 7 0.5000 0.859 0.430 ....TCCCrms TCCCTKG...

SP1 MA0079.3 D 10 0.8333 0.750 0.625 mkCCTCCCrm. .CCCCkCCCCy

MZF1_1-4 MA0056.1 R 6 0.5455 0.839 0.458 ....TCCCrm. TCCCCR

Total maches= 3

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 968 (13.75%)
Max nb of predicted sites per peak: 9
(rand_6026)
Mean nb of predicted sites per peak: 1.32

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 6 positions_6nt

CGCGCGCGCG

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor CGCGCGCGCG

NRF1 MA0506.1 D 10 0.9091 0.760 0.691 CGCGCGCGCG .CGCmTGCGCr

Total maches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 94 (1.34%)
Max nb of predicted sites per peak: 34
(rand_3635)
Mean nb of predicted sites per peak: 4.51

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 7 oligos_7nt_mkv5_m1

ktATTTTTAdww

WWHTAAAAATAM

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ktATTTTTAdww

MEF2C MA0497.1 R 12 0.8000 0.828 0.663 dtATTTTTAdww ..CTATTTTTRGMH.

MEF2A MA0052.2 R 12 0.8000 0.816 0.653 dtATTTTTAdww ...CTATTTTTRGMH

CDX2 MA0465.1 R 8 0.5333 0.819 0.437 ....TTTTAdww TTTTATKR...

Total maches= 4 (1 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 950 (13.49%)
Max nb of predicted sites per peak: 5
(rand_3679)
Mean nb of predicted sites per peak: 1.15

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 8 oligos_7nt_mkv5_m2

ycCTGCCTCms

SKGAGGCAGGR

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ycCTGCCTCms

TFAP2A MA0003.1 D 7 0.5385 0.773 0.416 ....GCCTCmg GCCcbrr..

Total maches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 828 (11.76%)
Max nb of predicted sites per peak: 9
(rand_6113)
Mean nb of predicted sites per peak: 1.35

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 9 oligos_7nt_mkv5_m3

CyCtGTCTCwa

TWGAGACAGRG

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor CyCtGTCTCwa

Total maches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 667 (9.47%)
Max nb of predicted sites per peak: 6
(rand_3800)
Mean nb of predicted sites per peak: 1.17

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 10 oligos_7nt_mkv5_m4

ccyCCaCCTCss

SSGAGGTGGRGG

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ccyCCaCCTCss

ZNF354C MA0130.1 D 6 0.5000 0.949 0.474 .cyCCAC..... mTCCAC

ZEB1 MA0103.1 D 6 0.5000 0.808 0.404 ....CACCTC.. CACCTk

Total maches= 2

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 733 (10.41%)
Max nb of predicted sites per peak: 10
(rand_6113)
Mean nb of predicted sites per peak: 1.47

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 11 oligos_7nt_mkv5_m5

wsrCTCTGTCtC

GAGACAGAGYSW

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wsrCTCTGTCtC

Total maches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 545 (7.74%)
Max nb of predicted sites per peak: 5
(rand_3800)
Mean nb of predicted sites per peak: 1.21

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 12 positions_7nt_m1

csyGCGmCrss

SSYGKCGCRSG

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csyGCGmCrss

Total maches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 326 (4.63%)
Max nb of predicted sites per peak: 38
(rand_3635)
Mean nb of predicted sites per peak: 2.58

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 13 positions_7nt_m2

SSSSsssSSSS

SSSSSSSSSSS

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor SSSSsssSSSS

Total maches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 315 (4.47%)
Max nb of predicted sites per peak: 169
(rand_746)
Mean nb of predicted sites per peak: 9.09

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 14 dyads_m1

scGCCCCCCaGCCCCss

SSGGGGCTGGGGGGCGS

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor scGCCCCCCaGCCCCss

SP1 MA0079.2 D 10 0.5882 0.822 0.483 ......CCCAGCCCCs. CCCCkCCCCC

Total maches= 1

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 358 (5.08%)
Max nb of predicted sites per peak: 34
(rand_746)
Mean nb of predicted sites per peak: 2.17

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 15 dyads_m2

ttTATTTTTATTTTaww

WWTAAAATAAAAATAAA

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ttTATTTTTATTTTaww

Total maches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 634 (9.00%)
Max nb of predicted sites per peak: 11
(rand_4350)
Mean nb of predicted sites per peak: 1.41

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 16 dyads_m3

kMCCyCwGCCTYCCTCCTSCy

RGSAGGAGGRAGGCWGRGGKM

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor kMCCyCwGCCTYCCTCCTSCy

Total maches= 0

No match

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 353 (5.01%)
Max nb of predicted sites per peak: 12
(rand_4126)
Mean nb of predicted sites per peak: 1.35

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Motif 17 dyads_m4

SyGCCCCCCCrCCCCss

SSGGGGYGGGGGGGCRS

[ matrix: tab format transfac format ]

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor SyGCCCCCCCrCCCCss

SP1 MA0079.3 D 11 0.6471 0.865 0.560 .....CCCCCRCCCCs. gCCCCkCCCCy

SP1 MA0079.2 D 10 0.5882 0.879 0.517 ......CCCCRCCCCs. CCCCkCCCCC

KLF5 MA0599.1 D 10 0.5882 0.860 0.506 .....CCCCCRCCCC.. gCCMCrCCCh

Total maches= 6 (3 more)

[ match table: html text ]
[ alignments (logos): html text ]

Predicted sites on test peaks

Distribution of sites

Nb of predicted sites per peak

Nb peaks with at least one predicted site: 367 (5.21%)
Max nb of predicted sites per peak: 23
(rand_746)
Mean nb of predicted sites per peak: 1.90

[ sites: text ]
[ distribution: text ]
[ sites per peak: text ]
[ enrichment: text graph ]

Word significance table
Word comparisons		[tab] [html] [heatmap]
Comparisons between discovered motifs
Discovered motifs versus discovered motifs		[ Discovered motif(s): tf ] [ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]
Discovered motifs versus transcription factor databases
Motifs versus jaspar_core_vertebrates database		[ table: html txt ] [ alignments (logo): html text ] [ graph: gml (for CytoScape) ]

Log files
Parameters and files		[txt] [html]
Time log		[time table] [time log] [html]

RSA-tools - peak-motifs result

Analysis: random-genome_fragments-siGATA_template (08/10/2014 08:48)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor dwCTTTTCwh

NFATC2 MA0152.1 D 7 0.7000 0.811 0.568 ...TTTTCwh TTTTCCA

Mecom MA0029.1 R 10 0.7143 0.758 0.542 wwCTTTTCwh ....ATCTTRTCTT

Total maches= 2

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syCACTGCAcyC

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csAGGCTGGGCkc

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor CGCGCGCGCG

NRF1 MA0506.1 D 10 0.9091 0.760 0.691 CGCGCGCGCG .CGCmTGCGCr

Total maches= 1

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ycCTGCCTCms

TFAP2A MA0003.1 D 7 0.5385 0.773 0.416 ....GCCTCmg GCCcbrr..

Total maches= 1

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor CyCtGTCTCwa

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ccyCCaCCTCss

ZNF354C MA0130.1 D 6 0.5000 0.949 0.474 .cyCCAC..... mTCCAC

ZEB1 MA0103.1 D 6 0.5000 0.808 0.404 ....CACCTC.. CACCTk

Total maches= 2

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wsrCTCTGTCtC

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csyGCGmCrss

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor SSSSsssSSSS

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor scGCCCCCCaGCCCCss

SP1 MA0079.2 D 10 0.5882 0.822 0.483 ......CCCAGCCCCs. CCCCkCCCCC

Total maches= 1

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ttTATTTTTATTTTaww

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor kMCCyCwGCCTYCCTCCTSCy

Total maches= 0

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

RSA-tools - peak-motifs result

Analysis: random-genome_fragments-siGATA_template (08/10/2014 08:48)

Command

Sequence composition

Discovered motifs (by algorithm)

Discovered motifs (with motif comparison)

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor dwCTTTTCwh NFATC2 MA0152.1 D 7 0.7000 0.811 0.568 ...TTTTCwh TTTTCCA Mecom MA0029.1 R 10 0.7143 0.758 0.542 wwCTTTTCwh ....ATCTTRTCTT Total maches= 2

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor syCACTGCAcyC Total maches= 0

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor csAGGCTGGGCkc Total maches= 0

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor CGCGCGCGCG NRF1 MA0506.1 D 10 0.9091 0.760 0.691 CGCGCGCGCG .CGCmTGCGCr Total maches= 1

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ycCTGCCTCms TFAP2A MA0003.1 D 7 0.5385 0.773 0.416 ....GCCTCmg GCCcbrr.. Total maches= 1

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor CyCtGTCTCwa Total maches= 0

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ccyCCaCCTCss ZNF354C MA0130.1 D 6 0.5000 0.949 0.474 .cyCCAC..... mTCCAC ZEB1 MA0103.1 D 6 0.5000 0.808 0.404 ....CACCTC.. CACCTk Total maches= 2

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor wsrCTCTGTCtC Total maches= 0

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor csyGCGmCrss Total maches= 0

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor SSSSsssSSSS Total maches= 0

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor scGCCCCCCaGCCCCss SP1 MA0079.2 D 10 0.5882 0.822 0.483 ......CCCAGCCCCs. CCCCkCCCCC Total maches= 1

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor ttTATTTTTATTTTaww Total maches= 0

jaspar_core_vertebrates name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match columns aligned correlation cor kMCCyCwGCCTYCCTCCTSCy Total maches= 0

Motif locations (sites)

Motif comparisons

Logs and parameter files

Publications

Results

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor dwCTTTTCwh

NFATC2 MA0152.1 D 7 0.7000 0.811 0.568 ...TTTTCwh TTTTCCA

Mecom MA0029.1 R 10 0.7143 0.758 0.542 wwCTTTTCwh ....ATCTTRTCTT

Total maches= 2

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor syCACTGCAcyC

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csAGGCTGGGCkc

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor CGCGCGCGCG

NRF1 MA0506.1 D 10 0.9091 0.760 0.691 CGCGCGCGCG .CGCmTGCGCr

Total maches= 1

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ycCTGCCTCms

TFAP2A MA0003.1 D 7 0.5385 0.773 0.416 ....GCCTCmg GCCcbrr..

Total maches= 1

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor CyCtGTCTCwa

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ccyCCaCCTCss

ZNF354C MA0130.1 D 6 0.5000 0.949 0.474 .cyCCAC..... mTCCAC

ZEB1 MA0103.1 D 6 0.5000 0.808 0.404 ....CACCTC.. CACCTk

Total maches= 2

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor wsrCTCTGTCtC

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor csyGCGmCrss

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor SSSSsssSSSS

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor scGCCCCCCaGCCCCss

SP1 MA0079.2 D 10 0.5882 0.822 0.483 ......CCCAGCCCCs. CCCCkCCCCC

Total maches= 1

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor ttTATTTTTATTTTaww

Total maches= 0

jaspar_core_vertebrates

name id strand Nb overlap % Pearson Normalized aligned col. motif aligned col. match

columns aligned correlation cor kMCCyCwGCCTYCCTCCTSCy

Total maches= 0