; convert-matrix  -v 1 -i $RSAT/public_html/tmp/apache/2014/10/08/peak-motifs.2014-10-08.083939_2014-10-08.083939_hIGyA6/results/oligos_7nt_mkv5/peak-motifs_oligos-2str-noov_7nt_mkv5_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/apache/2014/10/08/peak-motifs.2014-10-08.083939_2014-10-08.083939_hIGyA6/results/oligos_7nt_mkv5/peak-motifs_oligos-2str-noov_7nt_mkv5_pssm_count_matrices.txt
; Input files
;	input	/vh/rsat/rsat/public_html/tmp/apache/2014/10/08/peak-motifs.2014-10-08.083939_2014-10-08.083939_hIGyA6/results/oligos_7nt_mkv5/peak-motifs_oligos-2str-noov_7nt_mkv5_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/vh/rsat/rsat/public_html/tmp/apache/2014/10/08/peak-motifs.2014-10-08.083939_2014-10-08.083939_hIGyA6/results/oligos_7nt_mkv5/peak-motifs_oligos-2str-noov_7nt_mkv5_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	325	297	1277	0	0	0	0	0	1277	451	425	527
c	181	246	0	0	0	0	0	0	0	106	113	141
g	350	120	0	0	0	0	0	0	0	339	158	173
t	421	614	0	1277	1277	1277	1277	1277	0	381	581	436
//
a	136	100	1	20	14	7	1	13	2	315	114
c	256	419	890	62	1	865	869	1	890	252	202
g	133	118	2	27	877	1	21	30	0	162	401
t	368	256	0	784	1	20	2	849	1	164	176
//
a	101	91	8	8	9	11	4	12	4	253	409
c	459	305	766	142	1	3	780	0	785	124	126
g	87	90	13	13	779	4	3	20	0	88	128
t	142	303	2	626	0	771	2	757	0	324	126
//
a	94	140	65	6	3	595	4	5	35	1	150	89
c	361	304	239	718	703	3	722	704	2	729	276	248
g	131	130	122	7	18	130	1	19	60	2	203	234
t	147	159	307	2	9	5	6	5	636	1	104	162
//
a	243	134	299	7	14	7	10	5	6	4	169	82
c	113	209	106	708	4	719	68	0	6	723	94	437
g	73	235	175	11	28	3	17	723	2	0	146	74
t	301	152	150	4	684	1	635	2	716	3	321	137
//
; Host name	biow
; Job started	2014-10-08.084120
; Job done	2014-10-08.084120
; Seconds	0.27
;	user	0.27
;	system	0.01
;	cuser	0
;	csystem	0