; convert-matrix  -v 1 -i $RSAT/public_html/tmp/apache/2014/10/08/peak-motifs.2014-10-08.083939_2014-10-08.083939_hIGyA6/results/oligos_6nt_mkv4/peak-motifs_oligos-2str-noov_6nt_mkv4_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/apache/2014/10/08/peak-motifs.2014-10-08.083939_2014-10-08.083939_hIGyA6/results/oligos_6nt_mkv4/peak-motifs_oligos-2str-noov_6nt_mkv4_pssm_count_matrices.txt
; Input files
;	input	/vh/rsat/rsat/public_html/tmp/apache/2014/10/08/peak-motifs.2014-10-08.083939_2014-10-08.083939_hIGyA6/results/oligos_6nt_mkv4/peak-motifs_oligos-2str-noov_6nt_mkv4_pssm_count_matrices.tf
; Input format        	transfac
; Output files
;	output	/vh/rsat/rsat/public_html/tmp/apache/2014/10/08/peak-motifs.2014-10-08.083939_2014-10-08.083939_hIGyA6/results/oligos_6nt_mkv4/peak-motifs_oligos-2str-noov_6nt_mkv4_pssm_count_matrices.txt
; Output format       	tab
; pseudo-weight       	1
a	205	230	0	0	0	0	0	0	234	195
c	77	61	630	0	0	0	0	630	77	168
g	157	51	0	1	0	0	0	0	27	73
t	191	288	0	629	630	630	630	0	292	194
//
a	306	235	792	792	792	0	0	792	152	307
c	62	44	0	0	0	0	0	0	135	145
g	126	42	0	0	0	0	0	0	85	79
t	298	471	0	0	0	792	792	0	420	261
//
a	197	115	4	964	0	13	9	4	923	266	129	100
c	368	422	986	7	1002	42	5	982	9	534	384	644
g	330	76	5	24	3	20	986	6	44	128	139	91
t	110	392	10	10	0	930	5	13	29	77	353	170
//
a	168	110	709	14	12	8	26	14	17	15	29	192	207
c	366	432	37	11	107	817	64	11	22	18	740	115	301
g	169	189	47	807	707	17	30	807	795	616	46	208	158
t	146	118	56	17	23	7	729	17	15	200	34	334	183
//
a	357	263	13	4	11	9	12	0	347	302	241
c	306	166	1095	1099	6	1103	1089	1113	135	333	357
g	192	312	5	12	52	7	15	7	384	260	336
t	265	379	7	5	1051	1	4	0	254	225	186
//
; Host name	biow
; Job started	2014-10-08.084050
; Job done	2014-10-08.084050
; Seconds	0.25
;	user	0.25
;	system	0.02
;	cuser	0
;	csystem	0