; convert-matrix -v 1 -i $RSAT/public_html/tmp/apache/2014/10/07/peak-motifs.2014-10-07.150329_2014-10-07.150329_sPZtpE/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/apache/2014/10/07/peak-motifs.2014-10-07.150329_2014-10-07.150329_sPZtpE/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.txt
; Input files
; input /vh/rsat/rsat/public_html/tmp/apache/2014/10/07/peak-motifs.2014-10-07.150329_2014-10-07.150329_sPZtpE/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /vh/rsat/rsat/public_html/tmp/apache/2014/10/07/peak-motifs.2014-10-07.150329_2014-10-07.150329_sPZtpE/results/oligos_6nt_test_vs_ctrl/peak-motifs_oligos-2str-noov_6nt_test_vs_ctrl_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 178 210 115 69 64 74 71 36 50 53 76 63 80 71 162 161
c 601 517 356 308 1049 1061 98 1167 1019 1009 1028 156 951 976 568 541
g 423 471 827 929 201 178 1129 131 253 246 187 1082 266 251 448 481
t 176 180 80 72 64 65 80 44 56 70 87 77 81 80 200 195
//
a 73 101 58 47 39 62 35 31 26 34 32 259 23 37 32 34 286 34 57 47 105 99
c 232 218 132 107 468 431 48 473 444 446 463 161 73 112 97 492 129 105 129 139 237 178
g 235 207 371 430 84 79 498 82 104 96 96 166 505 442 457 74 147 443 390 370 197 241
t 79 93 58 35 28 47 38 33 45 43 28 33 18 28 33 19 57 37 43 63 80 101
//
a 102 77 451 0 0 1 456 0 9 122 93
c 158 174 45 9 15 2 60 1 494 171 129
g 154 219 17 513 506 517 5 521 2 118 210
t 108 52 9 0 1 2 1 0 17 111 90
//
a 153 137 120 109 106 88 107 81 62 81 55 67 55 60 59 61 55 35 327 68 105 94 162 157
c 514 510 621 396 680 723 734 305 887 202 918 840 880 853 158 886 882 934 392 311 313 340 535 476
g 386 435 329 600 332 316 276 744 207 850 190 239 239 218 941 226 244 200 376 776 732 699 373 418
t 171 142 154 119 106 97 107 94 68 91 61 78 50 93 66 51 43 55 129 69 74 91 154 173
//
a 101 91 46 48 64 205 39 44 46 29 40 40 34 20 22 35 240 35 49 49 33 143 74 96
c 259 251 165 424 440 198 107 499 457 487 472 43 489 506 494 485 168 110 146 147 514 218 261 255
g 195 204 376 135 119 177 461 84 110 94 82 528 103 97 91 106 187 482 429 421 71 203 236 214
t 98 107 66 46 30 73 46 26 40 43 59 42 27 30 46 27 58 26 29 36 35 89 82 88
//
; Host name biow
; Job started 2014-10-07.150602
; Job done 2014-10-07.150602
; Seconds 0.26
; user 0.26
; system 0.02
; cuser 0
; csystem 0