; convert-matrix -v 1 -i $RSAT/public_html/tmp/apache/2014/10/07/peak-motifs.2014-10-07.150329_2014-10-07.150329_sPZtpE/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf -from transfac -to tab -return counts -o $RSAT/public_html/tmp/apache/2014/10/07/peak-motifs.2014-10-07.150329_2014-10-07.150329_sPZtpE/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Input files
; input /vh/rsat/rsat/public_html/tmp/apache/2014/10/07/peak-motifs.2014-10-07.150329_2014-10-07.150329_sPZtpE/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.tf
; Input format transfac
; Output files
; output /vh/rsat/rsat/public_html/tmp/apache/2014/10/07/peak-motifs.2014-10-07.150329_2014-10-07.150329_sPZtpE/results/dyads_test_vs_ctrl/peak-motifs_dyads-2str-noov_3nt_sp0-20_bg_monads_pssm_count_matrices.txt
; Output format tab
; pseudo-weight 1
a 40 26 6 29 1 5 7 3 16 23 50 7 5 11 11 82 13 19 8 14 8 13 28 34
c 76 82 141 38 18 173 169 191 43 70 54 26 28 166 167 50 49 32 26 153 145 139 68 50
g 57 64 46 36 172 20 22 13 28 110 94 169 163 18 16 51 137 138 157 26 35 33 77 91
t 34 35 14 104 16 9 9 0 120 4 9 5 11 12 13 24 8 18 16 14 19 22 34 32
//
a 239 229 121 81 76 79 109 103 58 57 71 96 98 88 97 187 179
c 726 623 262 1223 1188 1203 1191 103 1270 1239 1224 1096 221 1129 1129 679 609
g 407 484 1065 188 222 230 180 1258 182 216 218 256 1138 270 245 451 559
t 210 246 134 90 96 70 102 118 72 70 69 134 125 95 111 265 235
//
a 159 182 24 26 22 9 102 311 14 30 18 36 92 122 179
c 456 389 50 1006 972 486 521 367 395 48 1028 924 202 428 334
g 337 330 1014 67 101 308 384 431 700 1010 56 125 258 392 410
t 166 217 30 19 23 315 111 9 9 30 16 33 566 176 195
//
a 380 415 136 98 92 249 206 50 520 359 261 57 59 391 91 143 143 134 366 335
c 1221 1138 533 373 2485 1396 1251 1519 1054 1112 1102 1381 1463 1386 1250 2007 2001 2038 1031 971
g 939 962 2082 2291 229 927 961 1233 1255 1368 1473 1198 1030 1031 1440 584 582 543 1039 1212
t 345 370 134 123 79 313 467 83 56 46 49 249 333 77 104 151 159 170 449 367
//
a 425 389 218 1033 168 134 106 112 128 555 439 391 127 128 172 419 450 185 192 156 160 253 414 448 281 244 263 463 425
c 1472 1338 2342 1063 691 1843 1779 1573 1688 1387 1288 1304 1731 1704 1773 1580 1385 1517 1492 1538 1700 2180 1356 1306 811 790 2261 1347 1243
g 1198 1386 792 1050 2510 1465 1256 1293 1570 1491 1711 1728 1563 1566 1465 1405 1582 1720 1709 1692 1516 861 1393 1425 2218 2304 797 1289 1439
t 452 434 195 401 178 105 406 569 161 114 109 124 126 149 137 143 130 125 154 161 171 253 384 368 237 209 226 448 440
//
; Host name biow
; Job started 2014-10-07.150756
; Job done 2014-10-07.150756
; Seconds 0.26
; user 0.26
; system 0.02
; cuser 0
; csystem 0